recipe mnnpy

Mutual nearest neighbors correction in python.

Homepage:

http://github.com/chriscainx/mnnpy

License:

BSD / BSD-3-Clause

Recipe:

/mnnpy/meta.yaml

package mnnpy

versions:

0.1.9.5-8,  0.1.9.5-6,  0.1.9.5-5,  0.1.9.5-4,  0.1.9.5-3,  0.1.9.5-2,  0.1.9.5-1,  0.1.9.5-0

depends _openmp_mutex:

>=4.5

depends anndata:

depends libgcc-ng:

>=12

depends numba:

depends numpy:

depends pandas:

depends python:

>=3.10,<3.11.0a0

depends python_abi:

3.10.* *_cp310

depends scipy:

<1.9.0

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install mnnpy

and update with::

   mamba update mnnpy

To create a new environment, run:

mamba create --name myenvname mnnpy

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/mnnpy:<tag>

(see `mnnpy/tags`_ for valid values for ``<tag>``)

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