recipe mobidic-mpa

MPA: MoBiDiC Prioritization Algorithm

Homepage:

https://neuro-2.iurc.montp.inserm.fr/mpaweb/

Developer docs:

https://github.com/mobidic/MPA

License:

MIT / MIT

Recipe:

/mobidic-mpa/meta.yaml

Links:

doi: 10.1016/j.jmoldx.2018.03.009

package mobidic-mpa

versions:

1.3.0-0,  1.2.6-0,  1.2.5-0,  1.2.4-0,  1.2.3-0,  1.2.2-0,  1.2.1-0,  1.2.0-0,  1.1.3-0, 

1.3.0-0,  1.2.6-0,  1.2.5-0,  1.2.4-0,  1.2.3-0,  1.2.2-0,  1.2.1-0,  1.2.0-0,  1.1.3-0,  1.1.2-0,  1.1.1-0

depends python:

depends tqdm:

>=4.59.0

depends vcfpy:

>=0.13.4

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install mobidic-mpa

and update with::

   mamba update mobidic-mpa

To create a new environment, run:

mamba create --name myenvname mobidic-mpa

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/mobidic-mpa:<tag>

(see `mobidic-mpa/tags`_ for valid values for ``<tag>``)

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