recipe modeltest-ng

ModelTest-NG is a tool for selecting the best-fit model of evolution for DNA and protein alignments.

Homepage:

https://github.com/ddarriba/modeltest

Documentation:

https://github.com/ddarriba/modeltest/wiki

License:

GPL / GPL-3.0

Recipe:

/modeltest-ng/meta.yaml

Links:

doi: 10.1093/molbev/msz189, doi: 10.1093/sysbio/syu084

package modeltest-ng

(downloads) docker_modeltest-ng

versions:

0.1.7-2,  0.1.7-1,  0.1.7-0,  0.1.6-1,  0.1.6-0,  0.1.5-0

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends openmpi:

>=4.1.5,<5.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install modeltest-ng

and update with::

   mamba update modeltest-ng

To create a new environment, run:

mamba create --name myenvname modeltest-ng

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/modeltest-ng:<tag>

(see `modeltest-ng/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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