recipe molpopgen-analysis

Deprecated and no longer maintained programs for the (pre-NGS-era) analysis of population-genetic data. Unless you work with Sanger data, results will be wrong. Please check the software homepage for more details.

Homepage:

https://github.com/molpopgen/analysis

License:

GNU General Public License v2 (GPLv2)

Recipe:

/molpopgen-analysis/meta.yaml

package molpopgen-analysis

versions:

0.8.8-10,  0.8.8-9,  0.8.8-8,  0.8.8-7,  0.8.8-6,  0.8.8-5,  0.8.8-4,  0.8.8-3,  0.8.8-2, 

0.8.8-10,  0.8.8-9,  0.8.8-8,  0.8.8-7,  0.8.8-6,  0.8.8-5,  0.8.8-4,  0.8.8-3,  0.8.8-2,  0.8.8-1,  0.8.8-0

depends gsl:

>=2.7,<2.8.0a0

depends libgcc:

>=13

depends libsequence:

1.8.4.*

depends libstdcxx:

>=13

depends openblas:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install molpopgen-analysis

and update with::

   mamba update molpopgen-analysis

To create a new environment, run:

mamba create --name myenvname molpopgen-analysis

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/molpopgen-analysis:<tag>

(see `molpopgen-analysis/tags`_ for valid values for ``<tag>``)

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Link to this page

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