recipe monocle3-cli

A set of wrappers for individual components of the monocle3 package. Functions R packages are hard to call when building workflows outside of R, so this package adds a set of simple wrappers with robust argument parsing. Intermediate steps are currently monocle3 R objects, but the ultimate objective is to have language-agnostic intermediate formats allowing composite workflows using a variety of software packages.

Homepage

https://github.com/ebi-gene-expression-group/monocle-scripts

License

Apache / Apache-2.0

Recipe

/monocle3-cli/meta.yaml

package monocle3-cli

(downloads) docker_monocle3-cli

Versions

0.0.4-0, 0.0.3-1, 0.0.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install monocle3-cli

and update with:

conda update monocle3-cli

or use the docker container:

docker pull quay.io/biocontainers/monocle3-cli:<tag>

(see monocle3-cli/tags for valid values for <tag>)