recipe mosdepth

Fast BAM/CRAM depth calculation for WGS, exome, or targetted sequencing.

Homepage

https://github.com/brentp/mosdepth

License

MIT

Recipe

/mosdepth/meta.yaml

package mosdepth

(downloads) docker_mosdepth

Versions
0.3.1-00.2.9-10.2.9-00.2.7-00.2.6-00.2.5-00.2.4-00.2.3-10.2.3-0

0.3.1-00.2.9-10.2.9-00.2.7-00.2.6-00.2.5-00.2.4-00.2.3-10.2.3-00.2.2-10.2.1-10.2.1-00.2.0-00.1.9-00.1.7-00.1.6-00.1.5-00.1.4a-00.1.3-00.1.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mosdepth

and update with:

conda update mosdepth

or use the docker container:

docker pull quay.io/biocontainers/mosdepth:<tag>

(see mosdepth/tags for valid values for <tag>)