recipe mosdepth

Fast BAM/CRAM depth calculation for WGS, exome, or targetted sequencing.

Homepage:

https://github.com/brentp/mosdepth

License:

MIT

Recipe:

/mosdepth/meta.yaml

Links:

doi: 10.1093/bioinformatics/btx699, biotools: mosdepth

package mosdepth

(downloads) docker_mosdepth

Versions:
0.3.3-20.3.3-10.3.3-00.3.2-10.3.2-00.3.1-20.3.1-10.3.1-00.2.9-1

0.3.3-20.3.3-10.3.3-00.3.2-10.3.2-00.3.1-20.3.1-10.3.1-00.2.9-10.2.9-00.2.7-00.2.6-00.2.5-00.2.4-00.2.3-10.2.3-00.2.2-10.2.1-10.2.1-00.2.0-00.1.9-00.1.7-00.1.6-00.1.5-00.1.4a-00.1.3-00.1.1-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install mosdepth

and update with:

conda update mosdepth

or use the docker container:

docker pull quay.io/biocontainers/mosdepth:<tag>

(see mosdepth/tags for valid values for <tag>)

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