recipe mrbayes

Bayesian Inference of Phylogeny

Homepage:

https://github.com/NBISweden/MrBayes

Documentation:

https://nbisweden.github.io/MrBayes/

License:

GPL3 / GPL-3.0-or-later

Recipe:

/mrbayes/meta.yaml

Links:

biotools: mrbayes

MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. MrBayes uses Markov chain Monte Carlo (MCMC) methods to estimate the posterior distribution of model parameters.

package mrbayes

(downloads) docker_mrbayes

versions:
3.2.7-7,  3.2.7-6,  3.2.7-5,  3.2.7-4,  3.2.7-3,  3.2.7-2,  3.2.7-1,  3.2.7-0,  3.2.7a-0, 

3.2.7-7,  3.2.7-6,  3.2.7-5,  3.2.7-4,  3.2.7-3,  3.2.7-2,  3.2.7-1,  3.2.7-0,  3.2.7a-0,  3.2.6-0

depends beagle-lib:

<4

depends libgcc:

>=13

depends ncurses:

>=6.5,<7.0a0

depends openmpi:

>=4.1.6,<5.0a0

depends readline:

>=8.2,<9.0a0

requirements:

additional platforms:
linux-aarch64,  osx-arm64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install mrbayes

and update with::

   mamba update mrbayes

To create a new environment, run:

mamba create --name myenvname mrbayes

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/mrbayes:<tag>

(see `mrbayes/tags`_ for valid values for ``<tag>``)

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Render an install-with-bioconda badge with the following MarkDown:

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