recipe mtsv

MTSv is a suite of metagenomic binning and analysis tools.

Homepage

https://github.com/FofanovLab/MTSv

License

MIT / MIT

Recipe

/mtsv/meta.yaml

package mtsv

Versions

1.0.6-2,  1.0.6-1,  1.0.6-0,  1.0.5-0,  1.0.4-0,  1.0.3-0,  1.0.2-0

Depends

• biopython

• bwa

• click

• concoct

• ete3

• gsl

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• megahit

• mtsv-tools

• numpy

• pandas >=0.20.3

• python >=3.6,<3.7.0a0

• python_abi 3.6.* *_cp36m

• pyyaml

• samtools

• scipy

• six

• snakemake >=4.1.0

• wgfast

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mtsv

and update with:

conda update mtsv

or use the docker container:

docker pull quay.io/biocontainers/mtsv:<tag>

(see mtsv/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mtsv/README.html)