recipe nanocompore

Nanocompore identifies raw signal changes between two conditions dRNA-Seq data.

Homepage:

https://github.com/tleonardi/nanocompore

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/nanocompore/meta.yaml

Links:

usegalaxy-eu: nanocompore_db

package nanocompore

Versions:

1.0.4-0,  1.0.3-0,  1.0.2-0,  1.0.0rc3.post2-2,  1.0.0rc3.post2-0,  1.0.0rc3.post1-0

Depends:

• bedparse

• importlib_metadata

• loguru

• matplotlib-base

• numpy >=1.16.0

• pandas

• pyfaidx

• python >=3.6.1

• pyyaml

• scikit-learn 0.21.*

• scipy >=1.2.0

• seaborn

• statsmodels >=0.9.0

• tqdm

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install nanocompore

and update with:

conda update nanocompore

or use the docker container:

docker pull quay.io/biocontainers/nanocompore:<tag>

(see nanocompore/tags for valid values for <tag>)

Download stats

Link to this page

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