recipe ncbi-vdb

SRA tools database engine

Homepage

https://github.com/ncbi/ncbi-vdb

License

Public Domain

Recipe

/ncbi-vdb/meta.yaml

VDB is the database engine that all SRA tools use. It is a columnar database system with a number of unique features. All SRA objects are stored in VDB.

package ncbi-vdb

(downloads) docker_ncbi-vdb

Versions
2.10.8-02.10.7-02.10.6-02.10.5-02.10.4-02.10.3-02.10.2-02.10.1-02.10.0-0

2.10.8-02.10.7-02.10.6-02.10.5-02.10.4-02.10.3-02.10.2-02.10.1-02.10.0-02.9.6-02.9.3-02.9.1-02.9.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ncbi-vdb

and update with:

conda update ncbi-vdb

or use the docker container:

docker pull quay.io/biocontainers/ncbi-vdb:<tag>

(see ncbi-vdb/tags for valid values for <tag>)