recipe ndex2

Nice CX Python includes a client and a data model.

Homepage:

https://github.com/ndexbio/ndex2-client

Documentation:

https://github.com/ndexbio/ndex2-client/blob/master/README.rst

License:

BSD / BSD-3-Clause

Recipe:

/ndex2/meta.yaml

package ndex2

(downloads) docker_ndex2

versions:

3.9.0-0,  3.8.0-0,  3.7.0-0,  3.6.0-0,  3.5.1-0

depends ijson:

depends networkx:

depends numpy:

depends pandas:

depends python:

depends requests:

depends requests-toolbelt:

depends six:

depends urllib3:

>=1.16

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ndex2

and update with::

   mamba update ndex2

To create a new environment, run:

mamba create --name myenvname ndex2

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ndex2:<tag>

(see `ndex2/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ndex2/README.html)