recipe negative_training_sampler

Generates negative samples with the same GC distribution as the positive samples per chromosome.

Homepage:

https://github.com/kircherlab/negative_training_sampler

License:

MIT

Recipe:

/negative_training_sampler/meta.yaml

package negative_training_sampler

Versions:

0.3.1-0,  0.3.0-0,  0.2.0-0,  0.1.0-0

Depends:

• bedtools

• click

• dask

• pandas

• pybedtools

• pysam >=0.15

• python >=3.6

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install negative_training_sampler

and update with:

conda update negative_training_sampler

or use the docker container:

docker pull quay.io/biocontainers/negative_training_sampler:<tag>

(see negative_training_sampler/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/negative_training_sampler/README.html)