recipe neofox

Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descriptors

Homepage:

https://github.com/tron-bioinformatics/neofox

Documentation:

https://neofox.readthedocs.io/

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/neofox/meta.yaml

Links:

doi: 10.1093/bioinformatics/btab344

package neofox

(downloads) docker_neofox

Versions:

1.0.1-01.0.0-00.6.4-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install neofox

and update with:

conda update neofox

or use the docker container:

docker pull quay.io/biocontainers/neofox:<tag>

(see neofox/tags for valid values for <tag>)

Notes

NeoFox has some required and optional third party dependencies that have a non commercial use license. These dependencies can be installed following the guidelines here https://neofox.readthedocs.io/en/latest/02_installation.html#step-by-step-guide-without-docker. Furthermore, NeoFox requires to install some reference data, the installation process is described here https://neofox.readthedocs.io/en/latest/02_installation.html#configuration-of-the-reference-folder

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