ngshmmalign

downloads

ngshmmalign is a profile HMM aligner for NGS reads designed particularly for small genomes

Home https://github.com/cbg-ethz/ngshmmalign
Versions 0.1.1
License GNU General Public License v2 or later (GPLv2+)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/ngshmmalign/0.1.1

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ngshmmalign

and update with:

conda update ngshmmalign

docker

A Docker container is available at https://quay.io/repository/biocontainers/ngshmmalign.