recipe odamnet

Study molecular relationships between chemicals and rare diseases

Homepage:

https://pypi.org/project/ODAMNet/1.1.0/

Developer docs:

https://github.com/MOohTus/ODAMNet/tree/v1.1.0

License:

MIT

Recipe:

/odamnet/meta.yaml

package odamnet

versions:

1.1.0-0

depends alive-progress:

>=2.4.1

depends click:

>=8.0.1

depends click-option-group:

>=0.5.3

depends docutils:

0.18.1

depends multixrank:

>=0.1

depends ndex2:

>=3.5.0

depends networkx:

2.5

depends pandas:

>=1.3.5

depends python:

>=3.9

depends requests:

>=2.27.1

depends scipy:

>=1.7.3

depends sparqlwrapper:

>=1.8.5

depends statsmodels:

>=0.13.2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install odamnet

and update with::

   mamba update odamnet

To create a new environment, run:

mamba create --name myenvname odamnet

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/odamnet:<tag>

(see `odamnet/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an badge with the following MarkDown:

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