recipe ont_vbz_hdf_plugin

VBZ compression plugin for nanopore signal data

Homepage:

https://github.com/nanoporetech

License:

MOZILLA / MPL-2

Recipe:

/ont_vbz_hdf_plugin/meta.yaml

package ont_vbz_hdf_plugin

(downloads) docker_ont_vbz_hdf_plugin

versions:

1.0.1-6,  1.0.1-5,  1.0.1-4,  1.0.1-3,  1.0.1-2,  1.0.1-1,  1.0.1-0

depends hdf5:

>=1.14.3,<1.14.4.0a0

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends zstd:

>=1.5.6,<1.6.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ont_vbz_hdf_plugin

and update with::

   mamba update ont_vbz_hdf_plugin

To create a new environment, run:

mamba create --name myenvname ont_vbz_hdf_plugin

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ont_vbz_hdf_plugin:<tag>

(see `ont_vbz_hdf_plugin/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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