recipe panpasco

Pipeline for pangenome mapping and pairwise SNP distance

Homepage

https://gitlab.com/rki_bioinformatics/panpasco

License

MIT

Recipe

/panpasco/meta.yaml

PANPASCO uses linear computational pan-genomes and pairwise SNP distance calculation to improve distance matrix analyses

package panpasco

(downloads) docker_panpasco

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install panpasco

and update with:

conda update panpasco

or use the docker container:

docker pull quay.io/biocontainers/panpasco:<tag>

(see panpasco/tags for valid values for <tag>)