recipe pauda

PAUDA is a new approach toward the problem of comparing DNA reads against a database of protein reference sequences that is applicable to very large datasets consisting of hundreds of millions or billions of reads.

Homepage:

https://ab.inf.uni-tuebingen.de/software/pauda

License:

GPL

Recipe:

/pauda/meta.yaml

package pauda

Versions:

1.0.1-1,  1.0.1-0

Depends:

• bowtie2

• java-jdk

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pauda

and update with:

conda update pauda

or use the docker container:

docker pull quay.io/biocontainers/pauda:<tag>

(see pauda/tags for valid values for <tag>)

Download stats

Link to this page

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