recipe pauda

PAUDA is a new approach toward the problem of comparing DNA reads against a database of protein reference sequences that is applicable to very large datasets consisting of hundreds of millions or billions of reads.

Homepage

https://ab.inf.uni-tuebingen.de/software/pauda

License

GPL

Recipe

/pauda/meta.yaml

package pauda

Versions

1.0.1-1, 1.0.1-0

Depends

• bowtie2

• java-jdk

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pauda

and update with:

conda update pauda

or use the docker container:

docker pull quay.io/biocontainers/pauda:<tag>

(see pauda/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pauda/README.html)