recipe pbcore

A Python library for reading and writing PacBio data files

Homepage:

https://github.com/PacificBiosciences/pbbioconda

License:

BSD-3-Clause-Clear

Recipe:

/pbcore/meta.yaml

package pbcore

Versions:

2.1.2-2,  2.1.2-1,  2.1.2-0,  1.7.1-0,  1.6.5-0,  1.5.1-2,  1.5.1-1,  1.5.1-0,  1.2.10-2, 

2.1.2-2,  2.1.2-1,  2.1.2-0,  1.7.1-0,  1.6.5-0,  1.5.1-2,  1.5.1-1,  1.5.1-0,  1.2.10-2,  1.2.10-1,  1.2.10-0,  1.2.7-1,  1.2.7-0

Depends:

• biopython >=1.74

• numpy >=1.17

• pysam >=0.15.1

• python >=3.7,<3.8

• setuptools

Required By:

• pbalign

• pbh5tools

• genomicconsensus

• pbcoretools

• pbhoover

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pbcore

and update with:

conda update pbcore

or use the docker container:

docker pull quay.io/biocontainers/pbcore:<tag>

(see pbcore/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pbcore/README.html)