recipe pear

paired-end read merger

Homepage:

http://sco.h-its.org/exelixis/web/software/pear/

License:

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

Recipe:

/pear/meta.yaml

Links:

biotools: PEAR

package pear

versions:

0.9.6-10,  0.9.6-9,  0.9.6-8,  0.9.6-7,  0.9.6-6,  0.9.6-5,  0.9.6-4,  0.9.6-3,  0.9.6-2, 

0.9.6-10,  0.9.6-9,  0.9.6-8,  0.9.6-7,  0.9.6-6,  0.9.6-5,  0.9.6-4,  0.9.6-3,  0.9.6-2,  0.9.6-1,  0.9.6-0

depends bzip2:

>=1.0.8,<2.0a0

depends libgcc-ng:

>=12

depends libzlib:

>=1.2.13,<1.3.0a0

depends zlib:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install pear

and update with::

   mamba update pear

To create a new environment, run:

mamba create --name myenvname pear

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/pear:<tag>

(see `pear/tags`_ for valid values for ``<tag>``)

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