recipe pepr

Peak-calling and Prioritization pipeline for replicated ChIP-Seq data

Homepage

https://github.com/shawnzhangyx/PePr/

License

GPL / GNU General Public License v3 (GPLv3)

Recipe

/pepr/meta.yaml

package pepr

(downloads) docker_pepr

Versions

1.1.24-1, 1.1.24-0, 1.1.18-0, 1.0.9-0

Depends numpy

>=1.6.0

Depends pysam

Depends python

>=2.7,<2.8.0a0

Depends scipy

>=0.14.0

Depends sharedmem

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pepr

and update with:

conda update pepr

or use the docker container:

docker pull quay.io/biocontainers/pepr:<tag>

(see pepr/tags for valid values for <tag>)