recipe perl-pcap

NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project

Homepage:

https://github.com/ICGC-TCGA-PanCancer/PCAP-core

License:

GPLv3

Recipe:

/perl-pcap/meta.yaml

package perl-pcap

Versions:

3.5.2-2,  3.5.2-1,  3.5.2-0,  1.11.1-2,  1.11.1-1,  1.11.1-0

Depends:

• libgcc-ng >=10.3.0

• perl >=5.32.1,<5.33.0a0 *_perl5

• perl-bio-db-hts

• perl-bio-samtools

• perl-bioperl

• perl-encode-locale

• perl-gd

• perl-ipc-system-simple

• perl-lwp-simple

• perl-sanger-cgp-vcf

• perl-xml-parser

Required By:

• perl-sanger-cgp-battenberg

• brass

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install perl-pcap

and update with:

conda update perl-pcap

or use the docker container:

docker pull quay.io/biocontainers/perl-pcap:<tag>

(see perl-pcap/tags for valid values for <tag>)

Download stats

Link to this page

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