recipe perl-sanger-cgp-vcf

a set of common perl utilities for generating consistent Vcf headers

Homepage:

https://github.com/cancerit/cgpVcf

License:

GPLv3

Recipe:

/perl-sanger-cgp-vcf/meta.yaml

package perl-sanger-cgp-vcf

Versions:

2.2.1-9,  2.2.1-8,  2.2.1-7,  2.2.1-6,  2.2.1-5,  2.2.1-4,  2.2.1-3,  2.2.1-2,  2.2.1-1, 

2.2.1-9,  2.2.1-8,  2.2.1-7,  2.2.1-6,  2.2.1-5,  2.2.1-4,  2.2.1-3,  2.2.1-2,  2.2.1-1,  2.2.1-0,  1.3.1-3,  1.3.1-2,  1.3.1-1,  1.3.1-0

Depends:

• libgcc-ng >=12

• perl >=5.32.1,<5.33.0a0 *_perl5

• perl-const-fast

• perl-data-uuid

• perl-datetime

• perl-ipc-system-simple 1.30.*

• perl-test-fatal 0.016.*

• perl-vcftools-vcf 0.1.16.*

Required By:

• perl-pcap

• perl-sanger-cgp-allelecount

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install perl-sanger-cgp-vcf

and update with:

conda update perl-sanger-cgp-vcf

or use the docker container:

docker pull quay.io/biocontainers/perl-sanger-cgp-vcf:<tag>

(see perl-sanger-cgp-vcf/tags for valid values for <tag>)

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