recipe perl-sanger-cgp-vcf

a set of common perl utilities for generating consistent Vcf headers

Homepage

https://github.com/cancerit/cgpVcf

License

GPLv3

Recipe

/perl-sanger-cgp-vcf/meta.yaml

package perl-sanger-cgp-vcf

(downloads) docker_perl-sanger-cgp-vcf

Versions

2.2.1-3, 2.2.1-2, 2.2.1-1, 2.2.1-0, 1.3.1-3, 1.3.1-2, 1.3.1-1, 1.3.1-0

Depends libgcc-ng

>=7.3.0

Depends perl

>=5.26.2,<5.26.3.0a0

Depends perl-const-fast

Depends perl-data-uuid

Depends perl-datetime

Depends perl-ipc-system-simple

Depends perl-test-fatal

Depends perl-vcftools-vcf

0.1.16

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install perl-sanger-cgp-vcf

and update with:

conda update perl-sanger-cgp-vcf

or use the docker container:

docker pull quay.io/biocontainers/perl-sanger-cgp-vcf:<tag>

(see perl-sanger-cgp-vcf/tags for valid values for <tag>)