recipe pgx-variant-tools

This library contains various methods and utilities for the calling and manipulation of normalized variants.

Homepage:

https://github.com/LUMC/pgx-variant-tools

License:

MIT / MIT

Recipe:

/pgx-variant-tools/meta.yaml

package pgx-variant-tools

Versions:

0.0.5-0,  0.0.4-0,  0.0.3-0,  0.0.2-2,  0.0.2-1,  0.0.2-0

Depends:

• biopython

• click

• cyvcf2

• numpy

• pyinterval

• python >=3.6

• python-edlib

• requests

• suds-jurko

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pgx-variant-tools

and update with:

conda update pgx-variant-tools

or use the docker container:

docker pull quay.io/biocontainers/pgx-variant-tools:<tag>

(see pgx-variant-tools/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pgx-variant-tools/README.html)