recipe phastaf

Identify phage regions in bacterial genomes for masking purposes

Homepage

https://github.com/tseemann/phastaf

License

GPL / GPLv3

Recipe

/phastaf/meta.yaml

package phastaf

Versions

0.1.0-0

Depends

• any2fasta >=0.4

• bedtools >=2.0

• coreutils

• diamond >=0.9

• perl

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install phastaf

and update with:

conda update phastaf

or use the docker container:

docker pull quay.io/biocontainers/phastaf:<tag>

(see phastaf/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/phastaf/README.html)