-
recipe
picard
¶ Java tools for working with NGS data in the BAM format
- Homepage
- Developer docs
- License
MIT / MIT
- Recipe
Java tools for working with NGS data in the BAM format. This package depends on ‘r-base’ because Picard requires R to run some of its metrics commands. The ‘picard-slim’ package offers an installation of Picard without the ‘r-base’ dependency.
-
package
picard
¶ -
- Versions
2.21.4-0, 2.21.3-0, 2.21.2-1, 2.21.2-0, 2.21.1-0, 2.20.8-0, 2.20.7-0, 2.20.6-0, 2.20.5-0, 2.20.4-1, 2.20.4-0, 2.20.3-0, 2.20.2-0, 2.20.1-0, 2.20.0-0, 2.19.2-0, 2.19.1-0, 2.19.0-0, 2.18.29-0, 2.18.27-0, 2.18.26-0, 2.18.25-0, 2.18.23-0, 2.18.22-0, 2.18.21-0, 2.18.20-0, 2.18.17-0, 2.18.16-0, 2.18.15-0, 2.18.14-0, 2.18.13-0, 2.18.12-0, 2.18.11-0, 2.18.10-0, 2.18.9-0, 2.18.7-2, 2.18.7-0, 2.18.6-0, 2.18.5-0, 2.18.4-0, 2.18.3-0, 2.18.2-0, 2.18.1-0, 2.18.0-0, 2.17.11-0, 2.17.10-0, 2.17.8-0, 2.17.6-0, 2.17.5-0, 2.17.4-0, 2.17.3-0, 2.17.2-0, 2.17.0-0, 2.16.0-0, 2.15.0-0, 2.14.1-0, 2.14-0, 2.13-1, 2.13-0, 2.11.0-0, 2.10.6-0, 2.9.2-2, 2.9.2-1, 2.9.2-0, 2.9.0-0, 2.7.1-2, 2.7.1-1, 2.7.1-0, 2.5.0-2, 2.5.0-1, 2.5.0-0, 2.3.0-0, 2.0.1-1, 2.0.1-0, 1.141-5, 1.141-4, 1.141-3, 1.141-1, 1.141-0, 1.139-0, 1.126-5, 1.126-4, 1.126-3, 1.126-2, 1.97-0, 1.56-1, 1.56-0
- Depends
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install picard
and update with:
conda update picard
or use the docker container:
docker pull quay.io/biocontainers/picard:<tag>
(see picard/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/picard/README.html)