recipe pifcosm

PisCoSm is a pipeline to construct supermatrix trees from GenBank data

Homepage:

https://github.com/RybergGroup/PifCoSm

License:

GPL-3.0-only

Recipe:

/pifcosm/meta.yaml

Links:

doi: 10.1073/pnas.1922539117

package pifcosm

Versions:

0.1.1-0

Depends:

• cd-hit

• fasttree

• gblocks

• hmmer

• mafft

• muscle

• perl

• perl-dbd-sqlite

• perl-dbi

• phylommand

• raxml

• roguenarok

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pifcosm

and update with:

conda update pifcosm

or use the docker container:

docker pull quay.io/biocontainers/pifcosm:<tag>

(see pifcosm/tags for valid values for <tag>)

Download stats

Link to this page

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