recipe pipelign

A pipeline for automated multiple sequence alignment, particularly of viral sequences.

Homepage:

https://github.com/asmmhossain/pipelign/

License:

MIT

Recipe:

/pipelign/meta.yaml

package pipelign

Versions:

0.2-2,  0.2-1,  0.2-0

Depends:

• biopython

• cd-hit

• ete3

• hmmer

• iqtree

• joblib

• mafft

• parallel

• python >=3

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pipelign

and update with:

conda update pipelign

or use the docker container:

docker pull quay.io/biocontainers/pipelign:<tag>

(see pipelign/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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