recipe pkiss

pKiss is a tool for folding RNA secondary structures, including two limited classes of pseudoknots. As pKiss is the successor of pknotsRG, the first pseudoknot class is the canonical simple recursive pseudoknot from pknotsRG. The new class are canonical simple recursive kissing hairpins.

Homepage

https://bibiserv.cebitec.uni-bielefeld.de/pkiss

License

Uknown - Please refer to the tool homepage

Recipe

/pkiss/meta.yaml

Links

doi: 10.1093/bioinformatics/btu649

package pkiss

(downloads) docker_pkiss

Versions

2.2.12-1, 2.2.12-0

Depends bellmans-gapc

Depends boost

1.64*

Depends gsl

2.2*

Depends libgcc

Depends openblas

Depends perl

5.22.0*

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pkiss

and update with:

conda update pkiss

or use the docker container:

docker pull quay.io/biocontainers/pkiss:<tag>

(see pkiss/tags for valid values for <tag>)