recipe planemo

Command-line utilities to assist in building tools for the Galaxy project (http://galaxyproject.org/).

Homepage:

https://github.com/galaxyproject/planemo

Documentation:

https://planemo.readthedocs.io/en/latest/

License:

MIT / MIT

Recipe:

/planemo/meta.yaml

package planemo

(downloads) docker_planemo

versions:
0.75.26-0,  0.75.25-0,  0.75.24-0,  0.75.22-0,  0.75.21-0,  0.75.20-0,  0.75.19-0,  0.75.18-0,  0.75.17-0, 

0.75.26-0,  0.75.25-0,  0.75.24-0,  0.75.22-0,  0.75.21-0,  0.75.20-0,  0.75.19-0,  0.75.18-0,  0.75.17-0,  0.75.15-0,  0.75.14-0,  0.75.12-0,  0.75.11-0,  0.75.10-0,  0.75.9-0,  0.75.3-0,  0.74.11-0,  0.74.10-0,  0.74.9-0,  0.74.8-0,  0.74.7-0,  0.74.6-0,  0.74.5-0,  0.74.4-1,  0.74.4-0,  0.74.3-0,  0.74.2-0,  0.74.1-0,  0.74.0-0,  0.73.0-0,  0.72.0-0,  0.70.0-1,  0.70.0-0,  0.62.1-2,  0.62.1-1,  0.62.1-0,  0.61.0-0,  0.60.0-0,  0.59.0-0,  0.57.1-1,  0.57.1-0,  0.57.0-0,  0.56.0-0,  0.55.0-1,  0.55.0-0,  0.54.0-1,  0.48.0-1,  0.48.0-0,  0.46.1-0,  0.40.1-0,  0.38.1-1,  0.34.1-2,  0.34.1-1,  0.34.1-0,  0.33.2-0,  0.29.1-0,  0.23.0-1,  0.23.0-0

depends allure-python-commons:

depends bioblend:

>=1.0.0

depends click:

!=8.0.2

depends cwltool:

>=1.0.20191225192155

depends ephemeris:

>=0.10.3

depends galaxy-tool-util:

>=23.1,!=24.0.0,!=24.0.1,<24.2

depends galaxy-util:

>=23.1,<24.2

depends glob2:

depends gxformat2:

>=0.14.0

depends h5py:

depends jinja2:

depends lxml:

depends oyaml:

depends pathvalidate:

depends python:

>=3.7

depends pyyaml:

depends tabulate:

depends virtualenv:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install planemo

and update with::

   mamba update planemo

To create a new environment, run:

mamba create --name myenvname planemo

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/planemo:<tag>

(see `planemo/tags`_ for valid values for ``<tag>``)

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Link to this page

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