recipe plannotate

Webserver and command line tool for annotating engineered plasmids

Homepage:

https://github.com/barricklab/pLannotate

License:

GPL-3

Recipe:

/plannotate/meta.yaml

package plannotate

Versions:

1.2.0-3,  1.2.0-2,  1.2.0-1,  1.2.0-0

Depends:

• biopython >1.77

• blast >=2.10.1

• bokeh 2.4.1.*

• click

• curl

• diamond >=2.0.13

• numpy

• pandas

• python >=3.7

• ripgrep >=13.0.0

• streamlit 1.2.0.*

• tabulate >=0.8.9

• trnascan-se >=2.0.7

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install plannotate

and update with:

conda update plannotate

or use the docker container:

docker pull quay.io/biocontainers/plannotate:<tag>

(see plannotate/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/plannotate/README.html)