recipe plasmidfinder

PlasmidFinder allows identification of plasmids in total or partial sequenced isolates of bacteria.

Homepage

https://bitbucket.org/genomicepidemiology/plasmidfinder

License

APACHE / Apache-2.0

Recipe

/plasmidfinder/meta.yaml

Links

doi: 10.1128/AAC.02412-14

package plasmidfinder

(downloads) docker_plasmidfinder

Versions

2.1-1, 2.1-0, 2.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install plasmidfinder

and update with:

conda update plasmidfinder

or use the docker container:

docker pull quay.io/biocontainers/plasmidfinder:<tag>

(see plasmidfinder/tags for valid values for <tag>)