recipe pm4ngs

PM4NGS generates a standard organizational structure for Next Generation Sequencing (ngs) data analysis

Homepage:

https://pypi.org/project/pm4ngs/

Developer docs:

https://github.com/ncbi/pm4ngs

License:

PUBLIC-DOMAIN / Public Domain

Recipe:

/pm4ngs/meta.yaml

package pm4ngs

Versions:

0.0.21-0,  0.0.20-0,  0.0.19-0,  0.0.18-0,  0.0.17-0,  0.0.16-0,  0.0.15-0,  0.0.14-0,  0.0.13-0, 

0.0.21-0,  0.0.20-0,  0.0.19-0,  0.0.18-0,  0.0.17-0,  0.0.16-0,  0.0.15-0,  0.0.14-0,  0.0.13-0,  0.0.12-0,  0.0.11-0,  0.0.9-0,  0.0.8-0,  0.0.7-0,  0.0.6-0,  0.0.5-0,  0.0.4-0,  0.0.3-0,  0.0.1-0

Depends:

• bioconda2biocontainer

• biopython

• cookiecutter

• cwltool

• docker-py

• galaxy-tool-util

• gitpython

• goenrichment

• jupyter

• matplotlib-base

• networkx

• numpy

• pandas

• pdf2image

• poppler

• python >=3.7

• pyyaml

• requests

• scipy

• seaborn

• statsmodels

• urllib3

• xmltodict

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pm4ngs

and update with:

conda update pm4ngs

or use the docker container:

docker pull quay.io/biocontainers/pm4ngs:<tag>

(see pm4ngs/tags for valid values for <tag>)

Download stats

Link to this page

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