recipe pmlst

Plasmid Multi-Locus Sequence Typing

Homepage:

https://bitbucket.org/genomicepidemiology/pmlst

License:

APACHE / APACHE-2.0

Recipe:

/pmlst/meta.yaml

package pmlst

(downloads) docker_pmlst

Versions:

2.0.3-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pmlst

and update with:

conda update pmlst

or use the docker container:

docker pull quay.io/biocontainers/pmlst:<tag>

(see pmlst/tags for valid values for <tag>)

Notes

pMLST requires database that can be downloaded with download-db.sh.

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