recipe popera

A software for DNase I hypersensitive sites identification.

Homepage:

https://github.com/forrestzhang/Popera

License:

MIT

Recipe:

/popera/meta.yaml

Links:

biotools: popera

package popera

versions:

1.0.3-0

depends numpy:

depends pybigwig:

depends pysam:

depends python:

>=3

depends samtools:

depends scipy:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install popera

and update with::

   mamba update popera

To create a new environment, run:

mamba create --name myenvname popera

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/popera:<tag>

(see `popera/tags`_ for valid values for ``<tag>``)

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