recipe porechop

Adapter removal and demultiplexing of Oxford Nanopore reads

Homepage:

https://github.com/rrwick/Porechop

License:

GPL3

Recipe:

/porechop/meta.yaml

package porechop

Versions:

0.2.4-3,  0.2.4-2,  0.2.4-1,  0.2.4-0,  0.2.3_seqan2.1.1-3,  0.2.3_seqan2.1.1-2,  0.2.3_seqan2.1.1-1,  0.2.3_seqan2.1.1-0

Depends:

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• python >=3.6,<3.7.0a0

• python_abi 3.6.* *_cp36m

Required By:

• metacerberus

• pomoxis

• dragonflye

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install porechop

and update with:

conda update porechop

or use the docker container:

docker pull quay.io/biocontainers/porechop:<tag>

(see porechop/tags for valid values for <tag>)

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