recipe porechop

Adapter removal and demultiplexing of Oxford Nanopore reads

Homepage

https://github.com/rrwick/Porechop

License

GPL3

Recipe

/porechop/meta.yaml

package porechop

Versions

0.2.4-0,  0.2.3_seqan2.1.1-3,  0.2.3_seqan2.1.1-2,  0.2.3_seqan2.1.1-1,  0.2.3_seqan2.1.1-0

Depends

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• python >=3.6,<3.7.0a0

• python_abi 3.6.* *_cp36m

Required By

• pomoxis

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install porechop

and update with:

conda update porechop

or use the docker container:

docker pull quay.io/biocontainers/porechop:<tag>

(see porechop/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/porechop/README.html)