recipe preface

PREFACE -- PREdict FetAl ComponEnt

Homepage:

https://github.com/CenterForMedicalGeneticsGhent/PREFACE

License:

GPLv3

Recipe:

/preface/meta.yaml

Links:

doi: https://doi.org/10.1002/pd.5508

package preface

versions:

0.1.2-0

depends r-base:

depends r-data.table:

>=1.1.18

depends r-doparallel:

>=1.0.14

depends r-foreach:

>=1.4.4

depends r-glmnet:

>=2.0_16

depends r-irlba:

>=2.3.3

depends r-mass:

>=7.3_49

depends r-neuralnet:

>=1.44.2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install preface

and update with::

   mamba update preface

To create a new environment, run:

mamba create --name myenvname preface

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/preface:<tag>

(see `preface/tags`_ for valid values for ``<tag>``)

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