recipe presto

A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.

Homepage:

https://presto.readthedocs.io

License:

AGPL / AGPL-3.0

Recipe:

/presto/meta.yaml

package presto

Versions:

0.7.1-0,  0.7.0-0,  0.6.2-0,  0.6.1-0,  0.6.0-0,  0.5.13-1,  0.5.13-0,  0.5.12-0,  0.5.10-0, 

0.7.1-0,  0.7.0-0,  0.6.2-0,  0.6.1-0,  0.6.0-0,  0.5.13-1,  0.5.13-0,  0.5.12-0,  0.5.10-0,  0.5.4-1,  0.5.4-0

Depends:

• biopython >=1.71

• blast >=2.5

• muscle >=3.8

• numpy >=1.8

• pandas >=0.24

• python >=3

• scipy >=0.14

• vsearch >=2.3.2

Required By:

• changeo

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install presto

and update with:

conda update presto

or use the docker container:

docker pull quay.io/biocontainers/presto:<tag>

(see presto/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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