recipe prodigal

Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program

Homepage:

http://prodigal.ornl.gov/

License:

GPL v3

Recipe:

/prodigal/meta.yaml

package prodigal

Versions:

2.6.3-4,  2.6.3-3,  2.6.3-2,  2.6.3-1,  2.6.3-0,  2.6.2-3,  2.6.2-2,  2.6.2-1

Depends:

• libgcc-ng >=10.3.0

Required By:

• pprodigal

• enrichm

• ppanggolin

• busco

• datma

• treesapp

• dfast_qc

• metawatt

• phigaro

• rgi

• panacota

• eggnog-mapper

• cat

• antismash

• metacerberus

• refinem

• vibrant

• deepbgc

• perl-bio-automatedannotation

• iphop

• run-dbcan

• genview

• drep

• das_tool

• autometa

• bioprov

• mdmcleaner

• platon

• antismash-lite

• iqkm

• mercat2

• hicap

• magpurify

• circlator

• comparem

• checkm-genome

• marvd2

• gtdbtk

• mercat

• metachip

• stag

• integron_finder

• bakta

• chewbbaca

• gunc

• viralverify

• metabinner

• gmgc-mapper

• fegenie

• dbcan

• emeraldbgc

• vrhyme

• pygmes

• semibin

• anvio

• taranis

• pharokka

• ngless

• fargene

• dram

• prokka

• pylprotpredictor

• find_differential_primers

• lorikeet-genome

• reparation_blast

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install prodigal

and update with:

conda update prodigal

or use the docker container:

docker pull quay.io/biocontainers/prodigal:<tag>

(see prodigal/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/prodigal/README.html)