recipe prosampler

An ultra-fast motif finding program in large ChIP-seq datasets.

Homepage:

https://github.com/zhengchangsulab/ProSampler

License:

GPLv3

Recipe:

/prosampler/meta.yaml

Links:

biotools: prosampler

package prosampler

versions:

1.5-1,  1.5-0,  1.0-0

depends libgcc:

>=13

depends libstdcxx:

>=13

requirements:

additional platforms:

linux-aarch64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install prosampler

and update with::

   mamba update prosampler

To create a new environment, run:

mamba create --name myenvname prosampler

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/prosampler:<tag>

(see `prosampler/tags`_ for valid values for ``<tag>``)

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