recipe pseudo-it

Reference-based genome assembly with iterative mapping

Homepage:

https://github.com/goodest-goodlab/pseudo-it

License:

GPL / GNU GPLv3

Recipe:

/pseudo-it/meta.yaml

Reference-based genome assembly with iterative mapping

package pseudo-it

Versions:

3.1.1-0,  3.1.0-0,  3.0.0-0

Depends:

• bcftools

• bedtools

• bwa

• gatk4

• picard

• python >=3.10

• samtools

• sed

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pseudo-it

and update with:

conda update pseudo-it

or use the docker container:

docker pull quay.io/biocontainers/pseudo-it:<tag>

(see pseudo-it/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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