recipe pyani

pyani provides a package and script for calculation of genome-scale average nucleotide identity.

Homepage:

http://widdowquinn.github.io/pyani/

License:

MIT / MIT

Recipe:

/pyani/meta.yaml

package pyani

Versions:

0.2.12-0,  0.2.11-0,  0.2.10-0,  0.2.9-0,  0.2.7-1,  0.2.7-0,  0.2.3-0,  0.2.0-0

Depends:

• biopython

• blast

• blast-legacy

• matplotlib-base

• mummer

• numpy

• pandas

• python >3

• scipy

• seaborn

Required By:

• anvio-minimal

• minys

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pyani

and update with:

conda update pyani

or use the docker container:

docker pull quay.io/biocontainers/pyani:<tag>

(see pyani/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pyani/README.html)