recipe pyani

pyani provides a package and script for calculation of genome-scale average nucleotide identity.

Homepage

http://widdowquinn.github.io/pyani/

License

MIT / MIT

Recipe

/pyani/meta.yaml

package pyani

(downloads) docker_pyani

Versions

0.2.9-0, 0.2.7-1, 0.2.7-0, 0.2.3-0, 0.2.0-0

Depends biopython

Depends blast

Depends blast-legacy

Depends matplotlib

Depends mummer

Depends numpy

Depends pandas

Depends python

>3

Depends scipy

Depends seaborn

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pyani

and update with:

conda update pyani

or use the docker container:

docker pull quay.io/biocontainers/pyani:<tag>

(see pyani/tags for valid values for <tag>)