recipe pybel

PyBEL is a Python package for parsing and handling biological networks encoded in the Biological Expression Language (BEL).

Homepage

https://pybel.readthedocs.io

Documentation

https://pybel.readthedocs.io/en/latest/

Developer docs

https://github.com/pybel/pybel

License

APACHE / Apache-2.0

Recipe

/pybel/meta.yaml

Links

doi: 10.1093/bioinformatics/btx660

package pybel

Versions

0.13.2-0,  0.9.3-1,  0.9.3-0,  0.5.4-0,  0.4.0-0

Depends

• bel-resources

• click

• click-plugins

• networkx >=2.1

• pyparsing

• python >=3.5

• requests

• requests-file

• sqlalchemy

• tqdm

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pybel

and update with:

conda update pybel

or use the docker container:

docker pull quay.io/biocontainers/pybel:<tag>

(see pybel/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pybel/README.html)