recipe pyctv_taxonomy

pyctv_taxonomy: download and use the ICTV Virus Metadata Resource

Homepage:

https://github.com/linsalrob/pyctv

License:

MIT / MIT

Recipe:

/pyctv_taxonomy/meta.yaml

Links:

doi: 10.5281/zenodo.7728567

package pyctv_taxonomy

versions:

0.25-0

depends openpyxl:

depends python:

>=3

depends requests:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install pyctv_taxonomy

and update with::

   mamba update pyctv_taxonomy

To create a new environment, run:

mamba create --name myenvname pyctv_taxonomy

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/pyctv_taxonomy:<tag>

(see `pyctv_taxonomy/tags`_ for valid values for ``<tag>``)

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