recipe pydnase

DNase-seq analysis library

Homepage

http://jpiper.github.io/pyDNase

Documentation

http://pythonhosted.org/pyDNase/index.html

License

MIT / MIT

Recipe

/pydnase/meta.yaml

A suite of tools for analysing DNase-seq data.

package pydnase

(downloads) docker_pydnase

Versions

0.3.0-1, 0.3.0-0, 0.2.6-1, 0.2.6-0

Depends bedtools

Depends clint

Depends matplotlib

Depends numpy

Depends pybedtools

Depends pysam

Depends python

>=3.5,<3.6.0a0

Depends samtools

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pydnase

and update with:

conda update pydnase

or use the docker container:

docker pull quay.io/biocontainers/pydnase:<tag>

(see pydnase/tags for valid values for <tag>)