recipe pydnase

DNase-seq analysis library

Homepage:

http://jpiper.github.io/pyDNase

Documentation:

http://pythonhosted.org/pyDNase/index.html

License:

MIT / MIT

Recipe:

/pydnase/meta.yaml

A suite of tools for analysing DNase-seq data.

package pydnase

Versions:

0.3.0-5,  0.3.0-4,  0.3.0-3,  0.3.0-2,  0.3.0-1,  0.3.0-0,  0.2.6-1,  0.2.6-0

Depends:

• bedtools

• clint

• matplotlib-base

• numpy

• pybedtools

• pysam

• python >=3.10,<3.11.0a0

• python_abi 3.10.* *_cp310

• samtools

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pydnase

and update with:

conda update pydnase

or use the docker container:

docker pull quay.io/biocontainers/pydnase:<tag>

(see pydnase/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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