recipe pyfastx

pyfastx is a python module for fast random access to sequences from plain and gzipped FASTA/Q file

Homepage:

https://github.com/lmdu/pyfastx

License:

MIT

Recipe:

/pyfastx/meta.yaml

package pyfastx

Versions:

1.1.0-3,  1.1.0-1,  1.1.0-0,  1.0.1-0,  0.9.1-0,  0.8.4-1,  0.8.4-0,  0.8.3-0,  0.8.2-1, 

1.1.0-3,  1.1.0-1,  1.1.0-0,  1.0.1-0,  0.9.1-0,  0.8.4-1,  0.8.4-0,  0.8.3-0,  0.8.2-1,  0.8.2-0,  0.8.1-0,  0.7.0-0,  0.6.16-0,  0.6.15-0,  0.6.14-0,  0.6.13-0,  0.6.12-0,  0.6.11-0,  0.6.10-0,  0.6.9-0,  0.6.8-0,  0.6.7-0,  0.6.6-0,  0.6.5-0,  0.6.4-0

Depends:

• libgcc-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• python >=3.10,<3.11.0a0

• python_abi 3.10.* *_cp310

• zlib

Required By:

• augur

• rlpipes

• treesapp

• amptk

• pynteny

• orfipy

• samsum

• hicstuff

• duplex-tools

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pyfastx

and update with:

conda update pyfastx

or use the docker container:

docker pull quay.io/biocontainers/pyfastx:<tag>

(see pyfastx/tags for valid values for <tag>)

Download stats

Link to this page

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