recipe pylprotpredictor

A tool to predict PYL proteins



Apache / Apache License



package pylprotpredictor

(downloads) docker_pylprotpredictor



depends biopython:

depends codecov:

depends diamond:

depends flake8:

depends pandas:

depends prodigal:

depends pytest-cov:

depends python:

depends requests:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install pylprotpredictor

and update with::

   mamba update pylprotpredictor

To create a new environment, run:

mamba create --name myenvname pylprotpredictor

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `pylprotpredictor/tags`_ for valid values for ``<tag>``)

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