recipe pymisc-utils

Utility library for rp-bp

Homepage:

https://github.com/dieterich-lab/pymisc-utils

License:

MIT

Recipe:

/pymisc-utils/meta.yaml

package pymisc-utils

versions:

0.2.11-6,  0.2.11-5,  0.2.11-4,  0.2.11-3,  0.2.11-2,  0.2.11-1,  0.2.11-0,  0.2.10-1,  0.2.10-0

depends dask:

depends docopt:

depends fastparquet:

depends graphviz:

depends joblib:

depends matplotlib-base:

depends networkx:

depends nltk:

depends numpy:

depends openpyxl:

depends pandas:

depends paramiko:

depends pydot:

depends python:

depends scikit-learn:

depends scipy:

depends six:

depends statsmodels:

depends tqdm:

depends xlrd:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install pymisc-utils

and update with::

   mamba update pymisc-utils

To create a new environment, run:

mamba create --name myenvname pymisc-utils

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/pymisc-utils:<tag>

(see `pymisc-utils/tags`_ for valid values for ``<tag>``)

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