recipe pyteomics

A framework for proteomics data analysis.

Homepage:

https://github.com/levitsky/pyteomics

License:

Apache-2.0

Recipe:

/pyteomics/meta.yaml

Links:

biotools: pyteomics

package pyteomics

Versions:

4.5.5-0,  4.5.4-0,  4.5.3-0,  4.5.2-0,  4.5.1-0,  4.5-0,  4.4.2-0,  4.4.1-0,  4.4.0-0, 

4.5.5-0,  4.5.4-0,  4.5.3-0,  4.5.2-0,  4.5.1-0,  4.5-0,  4.4.2-0,  4.4.1-0,  4.4.0-0,  4.3.3-0,  4.3.2-1,  4.3.2-0,  4.2-0,  4.1.2-0,  4.1.1-0,  4.1-0,  4.0.1-0,  3.5.1-2,  3.5.1-0,  3.4-1,  3.4-0

Depends:

• lxml

• matplotlib-base

• numpy

• pandas

• python

• sqlalchemy

Required By:

• beamspy

• fastg2protlib

• sampei

• diffacto

• pmultiqc

• prophane

• psm_fragments

• ms2pip

• seq-to-first-iso

• matchms

• msproteomicstools

• moff

• spectrum_utils

• iptkl

• pypgatk

• probamconvert

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pyteomics

and update with:

conda update pyteomics

or use the docker container:

docker pull quay.io/biocontainers/pyteomics:<tag>

(see pyteomics/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pyteomics/README.html)