recipe pyteomics

A framework for proteomics data analysis.

Homepage

https://bitbucket.org/levitsky/pyteomics

License

Apache License, Version 2.0

Recipe

/pyteomics/meta.yaml

Links

biotools: pyteomics

package pyteomics

Versions

4.4.2-0,  4.4.1-0,  4.4.0-0,  4.3.3-0,  4.3.2-1,  4.3.2-0,  4.2-0,  4.1.2-0,  4.1.1-0, 

4.4.2-0,  4.4.1-0,  4.4.0-0,  4.3.3-0,  4.3.2-1,  4.3.2-0,  4.2-0,  4.1.2-0,  4.1.1-0,  4.1-0,  4.0.1-0,  3.5.1-2,  3.5.1-0,  3.4-1,  3.4-0

Depends

• lxml

• matplotlib-base

• numpy

• pandas

• python

• sqlalchemy

Required By

• fastg2protlib

• psm_fragments

• msproteomicstools

• pmultiqc

• ms2pip

• beamspy

• spectrum_utils

• matchms

• probamconvert

• pypgatk

• moff

• sampei

• seq-to-first-iso

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pyteomics

and update with:

conda update pyteomics

or use the docker container:

docker pull quay.io/biocontainers/pyteomics:<tag>

(see pyteomics/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pyteomics/README.html)