recipe qiime/1.9.1

Quantitative Insights Into Microbial Ecology

Homepage:http://www.qiime.org License:GNU General Public License v2 (GPLv2) Recipe:/qiime/1.9.1/meta.yaml Links:biotools: qiime, doi: 10.1038/nmeth.f.303

package qiime

Versions:

1.9.1-1, 1.9.1-0, 1.8.0-1, 1.8.0-0

Depends:

• biom-format >=2.1.4,<2.2.0
• burrito >=0.9.1,<1.0.0
• burrito-fillings >=0.1.1,<0.2.0
• cogent ==1.5.3
• emperor >=0.9.51,<1.0.0
• gdata
• glib
• libgcc
• matplotlib >=1.1.0,!=1.4.2,<1.5.0
• mock
• natsort <4.0.0
• nose
• numpy 1.10*
• pandas >=0.13.1
• pynast ==1.2.2
• python 2.7*
• qcli >=0.1.1,<0.2.0
• qiime-default-reference >=0.1.2,<0.2.0
• scikit-bio >=0.2.3,<0.3.0
• scipy >=0.14.0
• xorg-libsm
• xorg-libxau
• xorg-libxdmcp
• xorg-libxext
• xorg-libxrender

Required By:

• koeken

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install qiime

and update with:

conda update qiime

or use the docker container:

docker pull quay.io/biocontainers/qiime:<tag>

(see qiime/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/qiime/README.html)